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Published by: Massachusetts Institute of Technology | Language: English
Published by: Massachusetts Institute of Technology | Language: English
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The course applies molecular biology and reverse genetics approaches to the study of apoptosis, or programmed cell death (PCD), in Drosophila cells. RNA interference (RNAi), or double stranded RNA-mediated gene silencing, will be used to inhibit expression of candidate apoptosis-related genes in cultured Drosophila cells. Teams of 2 or 3 st
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- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
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Published by: Massachusetts Institute of Technology | Language: English
Published by: Massachusetts Institute of Technology | Language: English
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This is a seminar based on research literature. Papers covered are selected to illustrate important problems and approaches in the field of computational and systems biology, and provide students a framework from which to evaluate new developments. The MIT Initiative in Computational and Systems Biology (CSBi) is a campus-wide research and
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Tag(s):
- biology
- computational biology
- systems biology
- genomics
- protein function
- nucleic acid binding factors
- microarray analysis
- genome-wide mapping
- gene expression
- evolutionary dynamics
- sequencing
- translation
- network motifs
- pathway modeling
- synthetic biology
- metagenomics
- signal transduction
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Published by: Massachusetts Institute of Technology | Language: English
Published by: Massachusetts Institute of Technology | Language: English
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Serving as an introduction to computational biology, this course emphasizes the fundamentals of nucleic acid and protein sequence analysis, structural analysis, and the analysis of complex biological systems. The principles and methods used for sequence alignment, motif finding, structural modeling, structure prediction, and network modelin
Author(s):
Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
File: 7-16-spring-2005.zip
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Download Course Materials
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Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: 7-91j-spring-2004.zip
This OER is part of OCW: Foundations of Computational and Systems Biology
Published under: /Download Course Materials
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Used by:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
File: 7-89j-fall-2010.zip
This OER is part of OCW: Topics in Computational and Systems Biology
Published under: /Download Course Materials
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Used by:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- genomics
- protein function
- nucleic acid binding factors
- microarray analysis
- genome-wide mapping
- gene expression
- evolutionary dynamics
- sequencing
- translation
- network motifs
- pathway modeling
- synthetic biology
- metagenomics
- signal transduction
File: minireview.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: stafford_minirev.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: finalpaper.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: stafford_prop.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: proposal.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
Share in:
OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: stafford_final.pdf
This OER is part of OCW: Experimental Molecular Biology: Biotechnology II
Published under: /Assignments
Share in:
OCW Authors:
Inherited Tag(s):
- biology
- rnai
- rna interference
- programmed cell death
- drosophilia
- pcd
- mrna
- lab notebook
- scientific writing
- rt-pcr
- s2 rna
- s2
- cell culture
- genetic transcription
- dsrna
- bioinformatics
File: homework3second.pdf
This OER is part of OCW: Foundations of Computational and Systems Biology
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
File: homework4.pdf
This OER is part of OCW: Foundations of Computational and Systems Biology
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
File: problem_set_2.pdf
This OER is part of OCW: Foundations of Computational and Systems Biology
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
File: homework1.pdf
This OER is part of OCW: Foundations of Computational and Systems Biology
Published under: /Assignments
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OCW Authors:
Inherited Tag(s):
- biology
- computational biology
- systems biology
- bioinformatics
- sequence analysis
- proteomics
- sequence alignment
- protein folding
- structure prediction
- network modeling
- phylogenetics
- pairwise sequence comparisons
- ncbi
- blast
- protein structure
- dynamic programming
- genome sequencing
- dna
- rna
- x-ray crystallography
- nmr
- homologs
- ab initio st
67 results found.
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